I didn't think you wanted to see me because I didn't hear back from you.
You didn't get back to me so I didn't think you wanted to get together.
どちらも「返事がこないから会いたくないのかと思った。」という言い方です。
1) I didn't think you wanted to see me because I didn't hear back from you.
2) You didn't get back to me so I didn't think you wanted to get together.
「返事がこない」は
to not hear back from 人
または「返信してくれない」で
to not get back to 人
を使って言えます。
ご参考になれば幸いです！
You didn't reply, so I thought you didn't want to see me anymore.
You didn't reply, so I thought you didn't want to see me anymore.
「返事が来ないから、もう会いたくないのかと思ってたよ。」
reply は「返事をする、返信する」という意味です。
例文：
Since you didn't reply to my message, I thought you didn't want to see me anymore!
「返事が来なかったから、もう私に会いたくないのかと思ってたよ！」
お役に立てれば嬉しいです。
日本 
アメリカ合衆国 
