"Why did you do it even though you knew I would hate it?"
"Why did you do it even though you knew I would hate it?" となります。「Why did you do it」は「なぜあなたはそれをしたのか」、「even though」は「にもかかわらず」、「you knew」は「あなたが知っていた」、「I would hate it」は「私がそれを嫌がるだろう」と言う意味です。
または、"Why did you do that knowing I wouldn't like it?" も同じ意味を持つフレーズです。